Run summary data
Master run log | log_20150812082038.txt
Previous run log | log_20150812074038.txt
BIOM table statistics | biom_table_summary.txt
Filtered BIOM table (minimum sequence count: 250) | table_mc250.biom.gz
rarefied BIOM table (sampling depth: 250) | table_even250.biom.gz
Taxonomic summary results
Taxa summary bar plots | bar_charts.html
Taxa summary area plots | area_charts.html
Taxonomic summary results (by body_site)
Taxa summary bar plots | bar_charts.html
Taxa summary area plots | area_charts.html
Group significance results
Category significance (body_site) | group_significance_body_site.txt
Alpha diversity results
Alpha rarefaction plots | rarefaction_plots.html
Alpha diversity statistics (body_site, chao1) | body_site_stats.txt
Alpha diversity boxplots (body_site, chao1) | body_site_boxplots.pdf
Alpha diversity statistics (body_site, observed_otus) | body_site_stats.txt
Alpha diversity boxplots (body_site, observed_otus) | body_site_boxplots.pdf
Alpha diversity statistics (body_site, PD_whole_tree) | body_site_stats.txt
Alpha diversity boxplots (body_site, PD_whole_tree) | body_site_boxplots.pdf
Beta diversity results (even sampling: 250)
Distance boxplots (unweighted_unifrac) | body_site_Distances.pdf
Distance boxplots statistics (unweighted_unifrac) | body_site_Stats.txt
PCoA plot (unweighted_unifrac) | index.html
Distance matrix (unweighted_unifrac) | unweighted_unifrac_dm.txt
Principal coordinate matrix (unweighted_unifrac) | unweighted_unifrac_pc.txt
Distance boxplots (weighted_unifrac) | body_site_Distances.pdf
Distance boxplots statistics (weighted_unifrac) | body_site_Stats.txt
PCoA plot (weighted_unifrac) | index.html
Distance matrix (weighted_unifrac) | weighted_unifrac_dm.txt
Principal coordinate matrix (weighted_unifrac) | weighted_unifrac_pc.txt

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