OtuPicker parameters:
best:1
blast:False
coverage:0.97
max_e_value:1.0
max_pos:10000
prefilter_identical_sequences:True
similarity:0.97
threads:28
Reference seqs fp (to build sortmerna database): /home/jona1883/software/American-Gut/data/AG/BLOOM.fasta
SortMeRNA database: /home/jona1883/software/American-Gut/ipynb/primary-processing/ag-May-31-2016/02-filtered/observed-blooms/sortmerna_picked_otus/BLOOM
Num OTUs: 10
Num failures: 191446188
Result path: /home/jona1883/software/American-Gut/ipynb/primary-processing/ag-May-31-2016/02-filtered/observed-blooms/sortmerna_picked_otus/fecal-sequences_otus.txt